Basic Information
Locus ID:
populus_peu25422
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
PDC3
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 2601281 | 2602998 | - | populus_peu25422 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 37,454.13 Da | 36.35 | 96.46 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 47 | 208 | 3.46835E-91 | - |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 44 | 210 | 1.3E-35 | IPR012001 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 241 | 338 | 1.7E-18 | IPR012000 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 44 | 219 | 3.03E-44 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 236 | 343 | 9.38E-27 | IPR029035 |
| Gene3D | G3DSA:3.40.50.970 | - | 40 | 217 | 5.3E-61 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 231 | 347 | 5.8E-29 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_011046856.1 | PREDICTED: pyruvate decarboxylase 2 [Populus euphratica] | 0 |
| Q9M040 | Pyruvate decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=PDC4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7Y8N3 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_052988 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology