Basic Information
Locus ID:
populus_peu25229
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 337138 | 346752 | - | populus_peu25229 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 103,822.06 Da | 39.86 | 95.48 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 647 | 797 | 5.3E-33 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 67 | 105 | 4.6E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 188 | 247 | 1.9E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 629 | 902 | 5.6E-59 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 65 | 405 | 7.14E-53 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 818 | 888 | 1.8E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 238 | 303 | 9.0E-16 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 615 | 719 | 1.1E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 720 | 817 | 2.1E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 67 | 237 | 5.3E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 304 | 419 | 1.1E-10 | IPR032675 |
| SMART | SM00220 | serkin_6 | 644 | 873 | 6.9E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 644 | 933 | 26.477942 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 762 | 774 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 650 | 672 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 873 | 901 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 874 | 901 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011001640.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Populus euphratica] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3N7G3D4 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G140200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology