Basic Information
Locus ID:
populus_peu25228
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 323018 | 331607 | - | populus_peu25228 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 106,327.52 Da | 37.53 | 94.45 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 624 | 890 | 1.84865E-88 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 60 | 98 | 8.9E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 621 | 885 | 2.9E-48 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 300 | 358 | 1.1E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 75 | 419 | 9.35E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 604 | 908 | 9.16E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 57 | 319 | 3.2E-67 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 694 | 907 | 1.1E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 320 | 434 | 2.1E-13 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 588 | 693 | 5.6E-33 | - |
| SMART | SM00369 | LRR_typ_2 | 299 | 323 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 345 | 369 | 7.6 | IPR003591 |
| SMART | SM00220 | serkin_6 | 618 | 890 | 1.0E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 227 | 251 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 155 | 179 | 38.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 618 | 891 | 37.516594 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 624 | 646 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 738 | 750 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011001644.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Populus euphratica] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2K1XFG4 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G140300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology