Basic Information
Locus ID:
populus_peu25196
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 12703 | 17727 | + | populus_peu25196 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 106,741.21 Da | 39.76 | 88.52 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 638 | 904 | 1.6588E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 635 | 902 | 5.8E-48 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 67 | 1.2E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 618 | 915 | 3.78E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 65 | 407 | 3.74E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 708 | 928 | 1.1E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 606 | 707 | 7.0E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 436 | 8.7E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 287 | 2.6E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 192 | 5.3E-39 | IPR032675 |
| SMART | SM00220 | serkin_6 | 632 | 906 | 4.8E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 632 | 907 | 38.746254 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 752 | 764 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 638 | 660 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011012973.1 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X3 [Populus euphratica] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | B9IH00 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_016G144100 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology