Basic Information
Locus ID:
populus_peu25094
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
leucine-rich repeat receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 18515400 | 18519658 | + | populus_peu25094 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 20,125.46 Da | 23.57 | 80.33 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 92 | 178 | 1.3E-17 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 58 | 179 | 4.07E-29 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 54 | 165 | 3.3E-33 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 90 | 182 | 15.97638 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15730.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_011021096.1 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730 isoform X1 [Populus euphratica] | 0 |
| Q9LFV3 | Calcium/calmodulin-regulated receptor-like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRLK2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7Y4L9 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_055153 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg16728, jg29538 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000009421, gene:ENSEOMG00000042156 |
| Amaranthaceae | Chenopodium quinoa | 16 | CQ.Regalona.r1.2AG0008970, CQ.Regalona.r1.2AG0009740 ... |
| Arecaceae | Cocos nucifera | 1 | COCNU_06G011020 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G2329 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G2495 |
| Poaceae | Oryza coarctata | 1 | Oco11G007370 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG20.18 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-12421, nbisL1-mrna-17488 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00018876 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-24574 |
| Salicaceae | Populus euphratica | 1 | populus_peu25094 |