Basic Information
Locus ID:
populus_peu24858
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 20539299 | 20545699 | - | populus_peu24858 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 54,343.45 Da | 36.12 | 93.10 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 31 | 350 | 4.7E-80 | IPR000490 |
| Pfam | PF07983 | X8 domain | 368 | 438 | 3.7E-18 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 31 | 350 | 5.69E-85 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 361 | 454 | 5.9E-11 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 30 | 355 | 2.3E-115 | - |
| SMART | SM00768 | X8_cls | 367 | 452 | 4.0E-48 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 265 | 278 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66250.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_011001568.1 | PREDICTED: glucan endo-1,3-beta-glucosidase 2 [Populus euphratica] | 0 |
| Q9C7U5 | Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2K1X7E0 | glucan endo-1,3-beta-D-glucosidase OS=Populus trichocarpa OX=3694 GN=POPTR_017G130200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology