Basic Information
Locus ID:
populus_peu24825
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 20883666 | 20887171 | + | populus_peu24825 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 95,377.88 Da | 42.15 | 89.95 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 330 | 365 | 1.8E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 256 | 296 | 6.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 589 | 789 | 3.2E-30 | IPR000719 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 391 | 427 | 1.9E-6 | IPR025875 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 66 | 2.3E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 432 | 4.93E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 529 | 803 | 1.43E-65 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 326 | 1.2E-84 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 513 | 595 | 2.8E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 597 | 815 | 2.1E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 327 | 445 | 5.5E-32 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 259 | 282 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 414 | 438 | 94.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 190 | 213 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 115 | 138 | 1.4 | IPR003591 |
| SMART | SM00220 | serkin_6 | 552 | 799 | 1.4E-20 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 94 | 116 | 7.026593 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 450 | 799 | 28.725248 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 558 | 580 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 644 | 656 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 439 | 468 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_011038249.1 | PREDICTED: probable receptor protein kinase TMK1 [Populus euphratica] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | U5FGQ1 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G134900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology