Basic Information
Locus ID:
populus_peu24665
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 22117250 | 22125071 | - | populus_peu24665 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.34 | 81,778.07 Da | 34.46 | 95.68 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 404 | 666 | 2.8E-39 | IPR001245 |
| Pfam | PF05096 | Glutamine cyclotransferase | 58 | 277 | 1.7E-77 | IPR007788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 387 | 668 | 6.37E-70 | IPR011009 |
| SUPERFAMILY | SSF50969 | YVTN repeat-like/Quinoprotein amine dehydrogenase | 64 | 281 | 1.49E-12 | IPR011044 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 475 | 681 | 1.7E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 371 | 474 | 1.4E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 400 | 672 | 32.103275 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 406 | 428 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_011046020.1 | PREDICTED: probable serine/threonine-protein kinase At1g01540 [Populus euphratica] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2K1X811 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G146000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 5 | jg12311, jg13949, jg2257, jg2259, jg6605 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_3244, gene_7144 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah009052, Ah018811 |
| Amaranthaceae | Beta vulgaris | 3 | BVRB_3g053360, BVRB_4g090300, BVRB_4g090320 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg38454, Sbi_jg6564 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg15358 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00006457 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl01890, Sgl07068 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000002704, gene:ENSEOMG00000028900 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.2BG0001220, CQ.Regalona.r1.3AG0003610 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30183520, pistato.v30183550 |
| Apiaceae | Apium graveolens | 2 | Ag10G02586, Ag4G02893 |
| Arecaceae | Cocos nucifera | 1 | COCNU_09G002410 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103712433 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.1630.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri18G16670, Ftri4G29503 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G25720.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10025771m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g23750.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB05g011630.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G1484 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G1575 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno16g02430 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0407s00013.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g03660 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2783 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00010476, Pov_00041022 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G21083 |
| Poaceae | Echinochloa crus-galli | 3 | AH06.25, BH06.20, CH06.18 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_6AG0505600, gene-QOZ80_6AG0505610 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0312400.1, HORVU.MOREX.r3.7HG0638390.1 |
| Poaceae | Oryza coarctata | 2 | Oco11G000200, Oco12G000160 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g01410.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_10G002000 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0404100 |
| Poaceae | Sporobolus alterniflorus | 7 | Chr0G007500, Chr0G007510, Chr0G023410, Chr0G023420 ... |
| Poaceae | Thinopyrum elongatum | 4 | Tel3E01G699200, Tel3E01G699400, Tel3E01G699500 ... |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC3AG062640, gene_TRIDC4AG067650 ... |
| Poaceae | Triticum aestivum | 7 | TraesCS3A02G442900.1, TraesCS3D02G435400.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb268480_P002 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-51239, nbis-gene-51240 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g31206, Zma_g31207, Zma_g31208 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG01.1436, evm.TU.LG06.1900, evm.TU.LG14.718 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g06870 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.87 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-29251 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-10283 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-2191 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000008l.53 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00001036 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-2332 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-6309 |
| Salicaceae | Populus euphratica | 4 | populus_peu09798, populus_peu09799, populus_peu24665 ... |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132631967, gene-LOC132631969 |
| Solanaceae | Solanum chilense | 1 | SOLCI007306400 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107012228, gene-LOC107012501 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.18731_chr07_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC08G1544 |
| Zosteraceae | Zostera marina | 2 | Zosma02g14670.v3.1, Zosma06g05280.v3.1 |