Basic Information
Locus ID:
populus_peu24664
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 22133440 | 22135011 | + | populus_peu24664 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 60,715.38 Da | 35.09 | 105.43 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 7 | 43 | 3.0E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 62 | 1.13E-11 | IPR036047 |
| SUPERFAMILY | SSF52058 | L domain-like | 119 | 386 | 3.74E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 126 | 511 | 8.1E-10 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 46 | 6.2E-8 | - |
| SMART | SM00256 | fbox_2 | 10 | 50 | 1.3E-5 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 4 | 57 | 11.828977 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02920.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_011046117.1 | PREDICTED: putative F-box/LRR-repeat protein At4g15060 [Populus euphratica] | 0 |
| Q1PE04 | F-box/LRR-repeat protein 25 OS=Arabidopsis thaliana OX=3702 GN=FBL25 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K1X809 | F-box domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G146300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology