Basic Information
Locus ID:
populus_peu24662
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 22138164 | 22140091 | + | populus_peu24662 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 50,608.95 Da | 46.37 | 105.02 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 11 | 50 | 5.0E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 10 | 76 | 1.96E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 115 | 421 | 7.3E-10 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 9 | 51 | 1.0E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 106 | 434 | 2.1E-6 | IPR032675 |
| SMART | SM00256 | fbox_2 | 15 | 55 | 0.0079 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 63 | 10.424773 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78750.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_024444540.2 | putative F-box/LRR-repeat protein At3g28410 [Populus trichocarpa] | 0 |
| TrEMBL | A0A8T2WQH9 | F-box domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_027686 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology