Basic Information
Locus ID:
populus_peu24661
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 22142173 | 22143612 | + | populus_peu24661 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.24 | 42,499.35 Da | 40.50 | 102.66 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 6 | 38 | 7.2E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 52 | 2.75E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 58 | 305 | 5.49E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 55 | 352 | 5.6E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 49 | 2.7E-7 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 4 | 39 | 10.000863 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02920.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_011046118.1 | PREDICTED: putative F-box/LRR-repeat protein At3g18150 [Populus euphratica] | 0 |
| Q1PE04 | F-box/LRR-repeat protein 25 OS=Arabidopsis thaliana OX=3702 GN=FBL25 PE=2 SV=1 | 0 | |
| TrEMBL | B9MX46 | F-box domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G146500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology