Basic Information
Locus ID:
populus_peu24659
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 22146731 | 22147841 | + | populus_peu24659 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.92 | 34,788.25 Da | 44.09 | 83.72 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00183 | Hsp90 protein | 168 | 298 | 3.9E-30 | IPR001404 |
| Pfam | PF00183 | Hsp90 protein | 2 | 108 | 3.4E-60 | IPR001404 |
| Pfam | PF00183 | Hsp90 protein | 111 | 169 | 1.6E-15 | IPR001404 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 2 | 149 | 6.52E-56 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 164 | 269 | 9.42E-21 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 1 | 102 | 3.8E-53 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 103 | 150 | 9.5E-11 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 167 | 274 | 1.1E-30 | IPR037196 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 304 | - | - |
| Coils | Coil | Coil | 148 | 168 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_011035347.1 | PREDICTED: heat shock protein 83-like isoform X2 [Populus euphratica] | 0 |
| P36182 | Heat shock protein 82 (Fragment) OS=Nicotiana tabacum OX=4097 GN=HSP82 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9VR81 | Heat shock protein 90 OS=Manihot esculenta OX=3983 GN=MANES_06G152800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology