Basic Information
Locus ID:
populus_peu24604
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 22534152 | 22538471 | + | populus_peu24604 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 38,504.77 Da | 27.43 | 87.67 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 40 | 222 | 1.72541E-89 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 85 | 210 | 1.5E-15 | IPR011766 |
| Pfam | PF00056 | lactate/malate dehydrogenase, NAD binding domain | 266 | 320 | 9.0E-18 | IPR001236 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 40 | 249 | 1.48E-41 | IPR029061 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 258 | 320 | 2.94E-15 | IPR036291 |
| Gene3D | G3DSA:3.40.50.720 | - | 254 | 328 | 5.4E-20 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 34 | 221 | 2.6E-57 | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54960.1 | pyruvate decarboxylase-2. pyruvate decarboxylase-2 | 0 |
| RefSeq | XP_011046076.1 | PREDICTED: pyruvate decarboxylase 1-like [Populus euphratica] | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N5N249 | pyruvate decarboxylase OS=Salix brachista OX=2182728 GN=DKX38_005640 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology