Basic Information
Locus ID:
populus_peu24041
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 2385328 | 2386099 | + | populus_peu24041 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.69 | 17,158.68 Da | 37.24 | 82.25 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 59 | 4.31E-9 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 62 | 3.6E-13 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 12 | 29 | 3.6E-13 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_011026389.1 | PREDICTED: calcium-dependent protein kinase 24 [Populus euphratica] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K1X2J0 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G031900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah039308 |
| Apiaceae | Apium graveolens | 2 | Ag1G00989, Ag2G00231 |
| Brassicaceae | Brassica nigra | 1 | BniB02g027910.2N |
| Poaceae | Zea mays | 3 | Zm00001eb016070_P001, Zm00001eb024950_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-1403, nbis-gene-38648 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-16587 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-931 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-13613, nbisL1-mrna-18710 |
| Salicaceae | Populus euphratica | 1 | populus_peu24041 |