Basic Information
Locus ID:
populus_peu23934
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 1319946 | 1323398 | + | populus_peu23934 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 94,736.02 Da | 34.87 | 101.40 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 680 | 856 | 1.2E-34 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 59 | 1.0E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 88 | 147 | 9.9E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 671 | 857 | 3.78E-55 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 341 | 7.82E-54 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 305 | 584 | 3.74E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 761 | 860 | 4.4E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 198 | 304 | 1.5E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 305 | 612 | 3.5E-79 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 18 | 197 | 2.7E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 647 | 760 | 2.0E-25 | - |
| SMART | SM00220 | serkin_6 | 678 | 861 | 2.3E-9 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 112 | 135 | 7.095899 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 678 | 863 | 31.73579 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 805 | 817 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 684 | 707 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_011043630.1 | PREDICTED: receptor-like protein kinase HSL1 [Populus euphratica] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | B9MYC8 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G016600 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology