Basic Information
Locus ID:
populus_peu23891
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 945643 | 948809 | - | populus_peu23891 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 47,087.92 Da | 16.35 | 83.01 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 312 | 440 | 7.42891E-35 | IPR033734 |
| CDD | cd09612 | Jacalin | 166 | 294 | 3.29998E-34 | IPR033734 |
| CDD | cd09612 | Jacalin | 18 | 148 | 9.52559E-36 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 180 | 295 | 1.2E-19 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 348 | 441 | 3.6E-22 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 58 | 149 | 6.7E-21 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 7 | 149 | 6.02E-33 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 301 | 441 | 6.28E-36 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 156 | 295 | 7.46E-31 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 152 | 296 | 1.6E-41 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 3 | 150 | 1.5E-43 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 297 | 445 | 1.2E-47 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 166 | 295 | 1.1E-18 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 312 | 441 | 3.6E-21 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 18 | 149 | 3.3E-19 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 155 | 295 | 39.906437 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 301 | 441 | 43.414257 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 7 | 149 | 39.240513 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39330.1 | jacalin-related lectin 23. | 0 |
| RefSeq | XP_011001798.1 | PREDICTED: mannose/glucose-specific lectin-like isoform X3 [Populus euphratica] | 0 |
| C0HLR9 | Mannose/glucose-specific lectin OS=Parkia pendula OX=1905032 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1X1P1 | Mannose/glucose-specific lectin-like OS=Populus trichocarpa OX=3694 GN=POPTR_017G010900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology