Basic Information
Locus ID:
populus_peu23824
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 29642 | 30997 | - | populus_peu23824 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 50,164.72 Da | 59.47 | 70.40 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 209 | 255 | 1.5E-10 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 21 | 71 | 6.93E-9 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 129 | 367 | 1.96E-33 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 108 | 412 | 6.7E-30 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 20 | 76 | 2.3E-6 | - |
| SMART | SM00256 | fbox_2 | 26 | 66 | 5.8E-4 | IPR001810 |
| SMART | SM00612 | kelc_smart | 167 | 220 | 0.66 | IPR006652 |
| SMART | SM00612 | kelc_smart | 222 | 269 | 7.0E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59940.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_011004544.1 | PREDICTED: F-box/kelch-repeat protein At2g44130-like [Populus euphratica] | 0 |
| Q9M1Y1 | F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1 | 0 | |
| TrEMBL | A9PGE1 | F-box domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G000700 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology