Basic Information
Locus ID:
populus_peu23794
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
protein STRUBBELIG-RECEPTOR FAMILY 5-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 22979319 | 22983757 | + | populus_peu23794 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 73,221.08 Da | 38.86 | 88.38 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 6.6E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 156 | 197 | 1.6E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 403 | 667 | 1.2E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 383 | 667 | 1.11E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 235 | 7.78E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 320 | 4.4E-47 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 364 | 476 | 4.2E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 477 | 670 | 4.7E-53 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 400 | 671 | 35.142082 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 163 | 185 | 7.119001 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 258 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78980.1 | STRUBBELIG-receptor family 5. | 0 |
| RefSeq | XP_011031253.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 5 [Populus euphratica] | 0 |
| Q6R2K1 | Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1ZLR2 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G002600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology