Basic Information
Locus ID:
populus_peu23511
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
lysM domain receptor-like kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 20526341 | 20528421 | - | populus_peu23511 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 72,634.91 Da | 39.92 | 89.70 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 378 | 618 | 4.1E-38 | IPR000719 |
| Pfam | PF01476 | LysM domain | 186 | 230 | 0.099 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 335 | 620 | 3.32E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 420 | 639 | 3.9E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 328 | 418 | 2.0E-13 | - |
| SMART | SM00220 | serkin_6 | 360 | 624 | 1.4E-16 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 280 | 624 | 31.340038 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 118 | 164 | 8.704658 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 184 | 229 | 9.125137 | IPR018392 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 257 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_011025695.1 | PREDICTED: lysM domain receptor-like kinase 4 [Populus euphratica] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | B9HEM3 | LysM domain receptor-like kinase 4 OS=Populus trichocarpa OX=3694 GN=POPTR_007G032100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology