Basic Information
Locus ID:
populus_peu23271
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 14874337 | 14883582 | + | populus_peu23271 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 114,114.28 Da | 37.71 | 79.64 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 48 | 325 | 4.82046E-176 | - |
| Pfam | PF09261 | Alpha mannosidase middle domain | 366 | 458 | 9.2E-20 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 611 | 822 | 1.3E-49 | IPR011682 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 904 | 1009 | 2.7E-13 | IPR041147 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 49 | 361 | 5.0E-91 | IPR000602 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 37 | 362 | 3.56E-107 | IPR011330 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 472 | 1012 | 1.19E-139 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 366 | 464 | 2.39E-26 | IPR028995 |
| Gene3D | G3DSA:2.60.40.1180 | - | 476 | 586 | 1.2E-24 | IPR013780 |
| Gene3D | G3DSA:2.60.40.1360 | - | 894 | 1012 | 3.6E-34 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 330 | 408 | 8.1E-31 | IPR037094 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 48 | 329 | 2.8E-118 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 409 | 464 | 1.6E-19 | IPR037094 |
| Gene3D | G3DSA:2.70.98.30 | - | 606 | 870 | 1.7E-97 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 366 | 440 | 6.3E-23 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66150.2 | - | 0 |
| RefSeq | XP_011008829.1 | PREDICTED: alpha-mannosidase isoform X1 [Populus euphratica] | 0 |
| C0HJB3 | Alpha-mannosidase OS=Canavalia ensiformis OX=3823 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5PRI1 | Alpha-mannosidase OS=Populus alba OX=43335 GN=D5086_0000189130 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology