Basic Information
Locus ID:
populus_peu23229
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 12648207 | 12651422 | - | populus_peu23229 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 30,990.34 Da | 48.62 | 81.80 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 16 | 179 | 5.92473E-98 | - |
| Pfam | PF00069 | Protein kinase domain | 18 | 179 | 2.6E-22 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 16 | 180 | 7.28E-37 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 16 | 179 | 3.5E-58 | - |
| SMART | SM00220 | serkin_6 | 4 | 179 | 5.0E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 179 | 15.962246 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17530.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034910152.1 | SRSF protein kinase 1-like isoform X2 [Populus alba] | 0 |
| O70551 | SRSF protein kinase 1 OS=Mus musculus OX=10090 GN=Srpk1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A4U5MAI0 | Protein kinase domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000314530 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah030804 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005657 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000006101, gene:ENSEOMG00000039927 ... |
| Arecaceae | Cocos nucifera | 3 | COCNU_03G000600, COCNU_09G005480, scaffold057081G000010 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120106072 |
| Brassicaceae | Brassica nigra | 1 | BniB02g013860.2N |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G1007 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g15450 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-6928 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-6120 |
| Salicaceae | Populus euphratica | 1 | populus_peu23229 |