Basic Information
Locus ID:
populus_peu23157
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 8157795 | 8162362 | - | populus_peu23157 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 110,429.22 Da | 40.30 | 71.35 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 189 | 285 | 8.78808E-42 | - |
| Pfam | PF00564 | PB1 domain | 202 | 285 | 3.7E-14 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 201 | 289 | 9.81E-19 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 930 | 975 | 7.51E-8 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 920 | 992 | 8.6E-12 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 204 | 287 | 3.3E-12 | - |
| SMART | SM00666 | PB1_new | 200 | 287 | 4.8E-23 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 938 | 997 | 8.697371 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 944 | 965 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 548 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 500 | 515 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 500 | 548 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.3 | - | 0 |
| RefSeq | XP_011014350.1 | PREDICTED: uncharacterized protein LOC105118160 [Populus euphratica] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1ZQG8 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G069500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology