Basic Information
Locus ID:
populus_peu22440
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 125382 | 126755 | - | populus_peu22440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 50,641.19 Da | 55.59 | 68.86 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 213 | 258 | 9.3E-8 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 26 | 71 | 5.76E-8 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 131 | 340 | 2.48E-33 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 77 | 363 | 1.6E-31 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 23 | 76 | 5.6E-6 | - |
| SMART | SM00256 | fbox_2 | 29 | 69 | 6.1E-4 | IPR001810 |
| SMART | SM00612 | kelc_smart | 170 | 223 | 1.1 | IPR006652 |
| SMART | SM00612 | kelc_smart | 225 | 272 | 2.4E-5 | IPR006652 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 128 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59940.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_011005241.1 | PREDICTED: F-box/kelch-repeat protein SKIP20-like [Populus euphratica] | 0 |
| Q9M1Y1 | F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7ZC72 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_027763 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology