Basic Information
Locus ID:
populus_peu22390
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the universal ribosomal protein uS3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 36550390 | 36553141 | - | populus_peu22390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.68 | 22,920.64 Da | 41.07 | 92.23 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00189 | Ribosomal protein S3, C-terminal domain | 78 | 160 | 3.7E-25 | IPR001351 |
| SUPERFAMILY | SSF54814 | Prokaryotic type KH domain (KH-domain type II) | 24 | 71 | 5.23E-11 | IPR009019 |
| SUPERFAMILY | SSF54821 | Ribosomal protein S3 C-terminal domain | 65 | 163 | 2.62E-28 | IPR036419 |
| Gene3D | G3DSA:3.30.1140.32 | - | 65 | 191 | 2.4E-66 | IPR036419 |
| Gene3D | G3DSA:3.30.300.20 | - | 24 | 64 | 6.2E-17 | IPR015946 |
| Gene3D | G3DSA:3.30.300.20 | - | 1 | 23 | 4.3E-5 | IPR015946 |
| TIGRFAM | TIGR01008 | uS3_euk_arch: ribosomal protein uS3 | 24 | 182 | 2.4E-51 | IPR005703 |
| ProSitePatterns | PS00548 | Ribosomal protein S3 signature. | 119 | 155 | - | IPR018280 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35530.1 | Ribosomal protein S3 family protein. | 0 |
| RefSeq | XP_034891076.1 | 40S ribosomal protein S3-3 [Populus alba] | 0 |
| Q9FJA6 | Small ribosomal subunit protein uS3x OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1 | 0 | |
| TrEMBL | A0A6M2F0Q3 | KH type-2 domain-containing protein OS=Populus davidiana OX=266767 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology