Basic Information
Locus ID:
populus_peu22331
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 35498856 | 35500268 | - | populus_peu22331 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 19,089.76 Da | 60.73 | 84.55 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 3 | 64 | 2.4E-14 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 149 | 1.89E-28 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 78 | 149 | 1.2E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 77 | 3.1E-23 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 165 | 15.877442 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 34 | 46 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56720.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010999309.1 | PREDICTED: probable receptor-like protein kinase At5g18500 [Populus euphratica] | 0 |
| Q8LEB6 | Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1 | 0 | |
| TrEMBL | B9HX98 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G001600 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 6 | Ag1G02048, Ag1G02049, Ag5G00954, Ag5G01786, Ag8G01819 ... |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.1113.V1.1 |
| Brassicaceae | Brassica nigra | 1 | BniB06g054260.2N |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.811 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-18637 |
| Salicaceae | Populus euphratica | 2 | populus_peu13163, populus_peu22331 |