Basic Information
Locus ID:
populus_peu22145
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
proteinaceous RNase P 1, chloroplastic mitochondrial-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 27777048 | 27783008 | - | populus_peu22145 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 95,653.37 Da | 45.95 | 72.84 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18718 | PIN_PRORP | 619 | 710 | 1.33487E-36 | - |
| Pfam | PF16953 | Protein-only RNase P | 646 | 757 | 1.9E-39 | IPR031595 |
| Pfam | PF16953 | Protein-only RNase P | 564 | 645 | 1.4E-17 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 376 | 523 | 4.7E-55 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 189 | 250 | 1.8E-15 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 194 | 611 | 3.1E-71 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 644 | 716 | 2.9E-30 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 436 | 470 | 9.152743 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 771 | 799 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 771 | 793 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 186 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_011044489.1 | PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X1 [Populus euphratica] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2YJC8 | ribonuclease P OS=Populus deltoides OX=3696 GN=H0E87_012495 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology