Basic Information
Locus ID:
populus_peu21837
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
proteinaceous RNase P 1, chloroplastic mitochondrial-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 16855601 | 16861762 | + | populus_peu21837 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.18 | 99,459.90 Da | 46.29 | 73.43 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 190 | 251 | 1.9E-15 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 565 | 790 | 2.9E-72 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 377 | 524 | 5.0E-55 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 375 | 793 | 5.1E-190 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 580 | 754 | 5.1E-190 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 437 | 471 | 9.152743 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 177 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 804 | 831 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 804 | 826 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_011044489.1 | PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X1 [Populus euphratica] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2YJC8 | ribonuclease P OS=Populus deltoides OX=3696 GN=H0E87_012495 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology