Basic Information
Locus ID:
populus_peu21550
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 12947795 | 12958133 | + | populus_peu21550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 31,046.90 Da | 34.16 | 71.20 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00433 | Protein kinase C terminal domain | 125 | 169 | 3.6E-7 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 5 | 106 | 2.6E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 158 | 2.97E-34 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 5 | 126 | 1.3E-45 | - |
| SMART | SM00220 | serkin_6 | 1 | 106 | 2.4E-5 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 107 | 171 | 5.2E-8 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 106 | 17.870337 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 107 | 179 | 14.498947 | IPR000961 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 222 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14350.3 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_011030490.1 | PREDICTED: serine/threonine-protein kinase tricorner isoform X1 [Populus euphratica] | 0 |
| Q6TGC6 | Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii OX=4754 GN=CBK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4V6AAX3 | Serine/threonine-protein kinase tricorner isoform X1 OS=Populus alba OX=43335 GN=D5086_0000059430 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.2901.V1.1, AsparagusV1_Unassigned.80.V1.1 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1263 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.1587 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-27470 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g00640, gene.Posoc01g35000 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000011l.538 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00007975 |
| Salicaceae | Populus euphratica | 1 | populus_peu21550 |