Basic Information
Locus ID:
populus_peu21240
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
U-box domain-containing protein 21-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 10370377 | 10372347 | - | populus_peu21240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.87 | 50,635.45 Da | 41.15 | 100.28 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 50 | 92 | 9.75061E-26 | - |
| Pfam | PF04564 | U-box domain | 46 | 117 | 3.5E-22 | IPR003613 |
| SUPERFAMILY | SSF48371 | ARM repeat | 158 | 435 | 6.78E-17 | IPR016024 |
| SUPERFAMILY | SSF57850 | RING/U-box | 37 | 122 | 5.3E-30 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 141 | 433 | 3.6E-16 | IPR011989 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 45 | 119 | 6.1E-28 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 49 | 112 | 1.6E-30 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 45 | 119 | 34.827286 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37490.1 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_011021738.1 | PREDICTED: U-box domain-containing protein 21-like [Populus euphratica] | 0 |
| Q5PNY6 | U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7YQF0 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_037916 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology