Basic Information
Locus ID:
populus_peu21192
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 9942291 | 9947788 | - | populus_peu21192 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 39,440.61 Da | 37.19 | 91.23 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 23 | 141 | 1.2E-19 | IPR000490 |
| Pfam | PF07983 | X8 domain | 285 | 356 | 4.8E-18 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 222 | 268 | 5.5E-10 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 23 | 268 | 2.04E-60 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 223 | 273 | 1.6E-12 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 139 | 222 | 2.0E-24 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 22 | 138 | 3.2E-31 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 278 | 366 | 1.0E-9 | - |
| SMART | SM00768 | X8_cls | 284 | 366 | 4.5E-41 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 210 | 223 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.3 | - | 0 |
| RefSeq | XP_011021800.1 | PREDICTED: glucan endo-1,3-beta-glucosidase 3-like isoform X2 [Populus euphratica] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3N7FLK6 | glucan endo-1,3-beta-D-glucosidase OS=Populus trichocarpa OX=3694 GN=POPTR_010G108500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology