Basic Information
Locus ID:
populus_peu21132
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 9359816 | 9367733 | - | populus_peu21132 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 183,937.63 Da | 46.54 | 77.63 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 380 | 653 | 1.10579E-117 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1379 | 1642 | 5.05152E-149 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1418 | 1584 | 1.0E-33 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 399 | 588 | 4.7E-28 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1369 | 1642 | 1.44E-82 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 446 | 614 | 1.38E-36 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1351 | 1499 | 3.4E-36 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 445 | 615 | 3.8E-48 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1501 | 1643 | 1.8E-42 | - |
| SMART | SM00330 | PIPK_2 | 1351 | 1643 | 1.5E-124 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1317 | 1642 | 58.765873 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 132 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 177 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 191 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_011038666.1 | PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C isoform X2 [Populus euphratica] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K1YSF1 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Populus trichocarpa OX=3694 GN=POPTR_010G113700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology