Basic Information
Locus ID:
populus_peu21028
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 8472424 | 8476260 | + | populus_peu21028 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 36,232.98 Da | 39.54 | 92.55 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 22 | 322 | 1.6E-75 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 17 | 325 | 2.09E-81 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 10 | 322 | 4.0E-99 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 2 | 261 | 1.7E-9 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 279 | 328 | 0.29 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 9 | 323 | 47.690582 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_011007918.1 | PREDICTED: homocysteine S-methyltransferase 1 [Populus euphratica] | 0 |
| A4ZGQ8 | Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN=HMT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2XSL3 | Hcy-binding domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_019097 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology