Basic Information
Locus ID:
populus_peu20805
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
PAS fold
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 6928359 | 6935233 | - | populus_peu20805 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 86,236.68 Da | 48.56 | 69.19 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 509 | 755 | 1.55498E-127 | - |
| CDD | cd00130 | PAS | 140 | 237 | 2.10269E-13 | IPR000014 |
| Pfam | PF00989 | PAS fold | 128 | 235 | 3.5E-12 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 503 | 755 | 1.2E-67 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 482 | 754 | 6.2E-84 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 131 | 234 | 1.47E-18 | IPR035965 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 496 | 580 | 3.9E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 581 | 780 | 8.2E-64 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 137 | 240 | 2.4E-23 | - |
| SMART | SM00220 | serkin_6 | 503 | 763 | 3.8E-58 | IPR000719 |
| SMART | SM00091 | pas_2 | 127 | 194 | 5.2E-9 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 127 | 237 | 2.4E-13 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 503 | 763 | 43.594215 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 125 | 196 | 16.895653 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 622 | 634 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 682 | 704 | 1.4E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 577 | 590 | 1.4E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 663 | 673 | 1.4E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 726 | 748 | 1.4E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 616 | 634 | 1.4E-11 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 465 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 364 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 381 | - | - |
| Coils | Coil | Coil | 8 | 35 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_011010480.1 | PREDICTED: dual specificity protein kinase splA-like [Populus euphratica] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | B9HX25 | Serine/threonine-protein kinase EDR1 OS=Populus trichocarpa OX=3694 GN=POPTR_010G146000 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology