Basic Information
Locus ID:
populus_peu20681
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 6010584 | 6011813 | + | populus_peu20681 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.50 | 32,876.91 Da | 29.06 | 100.75 | 0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13445 | RING-type zinc-finger | 73 | 102 | 3.0E-6 | IPR027370 |
| SUPERFAMILY | SSF57850 | RING/U-box | 65 | 130 | 3.45E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 63 | 163 | 5.4E-11 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 73 | 128 | 9.74522 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 92 | 101 | - | IPR017907 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69330.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_011012354.1 | PREDICTED: uncharacterized protein LOC105116618 [Populus euphratica] | 0 |
| TrEMBL | A0A8T2XUS9 | RING-type domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_019363 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology