Basic Information
Locus ID:
populus_peu20662
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
WRKY4
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 5891014 | 5894228 | - | populus_peu20662 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.31 | 54,096.72 Da | 58.50 | 48.87 | -0.97 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 389 | 446 | 2.0E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 223 | 279 | 2.0E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 380 | 448 | 1.7E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 220 | 281 | 1.83E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 373 | 449 | 2.9E-36 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 208 | 282 | 1.9E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 388 | 447 | 3.3E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 222 | 280 | 2.4E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 217 | 281 | 23.685972 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 383 | 448 | 38.411476 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 207 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 363 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_011012596.1 | PREDICTED: probable WRKY transcription factor 4 [Populus euphratica] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1X9J0V1 | WRKY transcription factor 3 family protein OS=Populus tomentosa OX=118781 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology