Basic Information
Locus ID:
populus_peu20157
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 2229152 | 2234649 | - | populus_peu20157 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.50 | 137,734.38 Da | 45.38 | 70.20 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00855 | PWWP domain | 721 | 751 | 8.1E-7 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 718 | 803 | 3.55E-15 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 714 | 760 | 6.6E-12 | - |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 723 | 767 | 10.641392 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 206 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 670 | 692 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 206 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 556 | 585 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 556 | 575 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 677 | 692 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 521 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 962 | 984 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 541 | - | - |
| Coils | Coil | Coil | 544 | 581 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_011027012.1 | PREDICTED: uncharacterized protein LOC105127429 isoform X2 [Populus euphratica] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K1YY60 | PWWP domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G216900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology