Basic Information
Locus ID:
populus_peu19500
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr19 | 20286473 | 20290042 | + | populus_peu19500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 106,229.27 Da | 31.55 | 101.62 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 433 | 492 | 3.3E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 121 | 179 | 9.6E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 660 | 927 | 2.1E-48 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 240 | 255 | 1.2 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 653 | 932 | 1.28E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 447 | 6.46E-71 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 409 | 565 | 6.12E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 740 | 945 | 3.4E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 98 | 201 | 5.1E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 657 | 739 | 2.8E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 264 | 576 | 1.1E-90 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 202 | 263 | 6.5E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3 | 97 | 3.3E-23 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 503 | 526 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 215 | 239 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 383 | 407 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 143 | 167 | 19.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 657 | 932 | 1.5E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 455 | 479 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 47 | 71 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 263 | 287 | 77.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 657 | 939 | 39.099602 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 241 | 264 | 7.226811 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 663 | 687 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 782 | 794 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 458 | 471 | 6.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 503 | 516 | 6.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_011036356.1 | PREDICTED: leucine-rich repeat receptor-like protein kinase PXL1 [Populus euphratica] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1WNB9 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G021700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology