Basic Information
Locus ID:
populus_peu18472
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 25881999 | 25885569 | - | populus_peu18472 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 57,495.96 Da | 40.08 | 91.44 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 45 | 364 | 1.6E-72 | IPR000490 |
| Pfam | PF07983 | X8 domain | 382 | 453 | 2.2E-21 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 45 | 364 | 1.79E-82 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 375 | 486 | 2.4E-12 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 44 | 371 | 2.1E-108 | - |
| SMART | SM00768 | X8_cls | 381 | 466 | 2.1E-50 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 279 | 292 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_011008030.1 | PREDICTED: glucan endo-1,3-beta-glucosidase 1-like [Populus euphratica] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A4U5Q1H2 | glucan endo-1,3-beta-D-glucosidase OS=Populus alba OX=43335 GN=D5086_0000148990 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology