Basic Information
Locus ID:
populus_peu18437
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 25584792 | 25590541 | - | populus_peu18437 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 57,674.95 Da | 34.30 | 94.92 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 71 | 1.8E-10 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 394 | 533 | 5.9E-24 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 239 | 8.93E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 375 | 528 | 9.02E-39 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 252 | 4.5E-46 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 368 | 448 | 1.4E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 449 | 535 | 7.9E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 535 | 22.110535 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 193 | 215 | 7.034293 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 292 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_011002569.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8-like isoform X1 [Populus euphratica] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7YP13 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_040411 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology