Basic Information
Locus ID:
populus_peu18434
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
BAH and coiled-coil domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 25567632 | 25572178 | + | populus_peu18434 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.97 | 25,636.87 Da | 43.15 | 64.85 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04714 | BAH_BAHCC1 | 31 | 165 | 1.88896E-56 | - |
| Pfam | PF01426 | BAH domain | 32 | 144 | 4.8E-23 | IPR001025 |
| Pfam | PF00628 | PHD-finger | 149 | 197 | 4.2E-10 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 139 | 198 | 5.76E-19 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 142 | 211 | 3.5E-20 | IPR013083 |
| Gene3D | G3DSA:2.30.30.490 | - | 5 | 141 | 4.6E-30 | IPR043151 |
| SMART | SM00249 | PHD_3 | 149 | 196 | 1.3E-9 | IPR001965 |
| SMART | SM00439 | BAH_4 | 30 | 145 | 1.2E-39 | IPR001025 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 30 | 145 | 22.727106 | IPR001025 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 147 | 198 | 9.0806 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 150 | 195 | - | IPR019786 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22140.2 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein. | 0 |
| RefSeq | XP_011002565.1 | PREDICTED: BAH and coiled-coil domain-containing protein 1-like [Populus euphratica] | 0 |
| F4JL28 | Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5Q1E5 | BAH and coiled-coil domain-containing protein 1-like OS=Populus alba OX=43335 GN=D5086_0000148690 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology