Basic Information
Locus ID:
populus_peu18320
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 24291394 | 24292093 | + | populus_peu18320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 15,749.51 Da | 42.25 | 74.30 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_024437416.1 | G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 isoform X39 [Populus trichocarpa] | 0 |
| P22553 | S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra OX=3714 GN=SLSG PE=2 SV=1 | 0 | |
| TrEMBL | A0A3N7FQ08 | non-specific serine/threonine protein kinase OS=Populus trichocarpa OX=3694 GN=POPTR_011G035901 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_207 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_12_RagTag.946 |
| Rhizophoraceae | Carallia pectinifolia | 4 | nbisL1-mrna-23865, nbisL1-mrna-23867, nbisL1-mrna-23869 ... |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000027l.29, add.evm.TU.utg000027l.30 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00017399, Maker00017467 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-2278 |
| Rhizophoraceae | Rhizophora mangle | 10 | nbisL1-mrna-23221, nbisL1-mrna-23222, nbisL1-mrna-23870 ... |
| Salicaceae | Populus euphratica | 4 | populus_peu18316, populus_peu18318, populus_peu18320 ... |