Basic Information
Locus ID:
populus_peu18124
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 21791798 | 21795104 | - | populus_peu18124 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 103,234.52 Da | 31.98 | 102.26 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 88 | 147 | 9.7E-10 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 209 | 230 | 0.48 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 59 | 2.3E-12 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 353 | 372 | 1.3 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 662 | 851 | 3.4E-28 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 327 | 568 | 6.91E-49 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 67 | 373 | 8.24E-63 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 646 | 903 | 3.24E-61 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 18 | 196 | 8.0E-50 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 713 | 929 | 4.2E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 625 | 712 | 1.1E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 304 | 1.1E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 305 | 573 | 1.4E-70 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 279 | 300 | 130.0 | - |
| SMART | SM00369 | LRR_typ_2 | 207 | 231 | 68.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 110 | 136 | 140.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 86 | 109 | 96.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 494 | 526 | 780.0 | - |
| SMART | SM00369 | LRR_typ_2 | 111 | 133 | 320.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 207 | 239 | 100.0 | - |
| SMART | SM00369 | LRR_typ_2 | 279 | 303 | 60.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 654 | 902 | 8.7E-13 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 542 | 565 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 494 | 518 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 86 | 110 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 134 | 157 | 19.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 654 | 905 | 26.520344 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 755 | 767 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_011001223.1 | PREDICTED: receptor-like protein kinase HSL1 [Populus euphratica] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | B9N3K0 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G058100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology