Basic Information
Locus ID:
populus_peu18085
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 21166959 | 21172564 | - | populus_peu18085 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 63,778.88 Da | 28.82 | 92.28 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 36 | 196 | 4.88873E-91 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 394 | 576 | 3.16869E-87 | - |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 229 | 346 | 1.0E-21 | IPR012000 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 439 | 564 | 5.0E-15 | IPR011766 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 32 | 198 | 1.1E-33 | IPR012001 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 218 | 371 | 1.13E-33 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 32 | 211 | 5.38E-43 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 394 | 586 | 3.75E-42 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 30 | 204 | 1.3E-59 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 219 | 381 | 1.8E-41 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 388 | 575 | 4.4E-57 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 27 | 588 | 5.3E-208 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_011045902.1 | PREDICTED: pyruvate decarboxylase 1 [Populus euphratica] | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K1YGB9 | pyruvate decarboxylase OS=Populus trichocarpa OX=3694 GN=POPTR_011G064000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology