Basic Information
Locus ID:
populus_peu18032
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 20167603 | 20173509 | - | populus_peu18032 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 68,056.68 Da | 39.24 | 100.33 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 297 | 564 | 4.0E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 3.1E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 195 | 1.98E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 276 | 567 | 7.62E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 264 | 369 | 5.7E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 212 | 1.3E-52 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 370 | 580 | 8.0E-62 | - |
| SMART | SM00220 | serkin_6 | 294 | 566 | 1.4E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 294 | 570 | 35.721577 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 300 | 322 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 416 | 428 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011039404.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X1 [Populus euphratica] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3N7FQR4 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G068700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology