Basic Information
Locus ID:
populus_peu17837
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 9971292 | 9976983 | + | populus_peu17837 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.81 | 70,119.92 Da | 42.79 | 86.72 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 27 | 113 | 9.4E-7 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 211 | 477 | 2.8E-92 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 16 | 114 | 6.12E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 13 | 133 | 5.7E-11 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 211 | 501 | 93.068283 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 97 | 10.199271 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 596 | 632 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 596 | 612 | - | - |
| Coils | Coil | Coil | 548 | 575 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_011015340.1 | PREDICTED: BTB/POZ domain-containing protein At1g30440-like [Populus euphratica] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A4U5P6Z2 | BTB/POZ domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000222430 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology