Basic Information
Locus ID:
populus_peu17574
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
spa1-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 4673433 | 4680069 | - | populus_peu17574 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 91,327.38 Da | 56.52 | 77.35 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 540 | 775 | 9.02E-33 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 74 | 353 | 3.98E-19 | IPR011009 |
| Gene3D | G3DSA:2.130.10.10 | - | 509 | 658 | 1.5E-41 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 83 | 351 | 1.2E-23 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 659 | 779 | 5.5E-36 | IPR015943 |
| SMART | SM00320 | WD40_4 | 581 | 615 | 6.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 733 | 777 | 27.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 616 | 674 | 0.043 | IPR001680 |
| SMART | SM00320 | WD40_4 | 683 | 722 | 12.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 539 | 578 | 9.2 | IPR001680 |
| SMART | SM00220 | serkin_6 | 7 | 343 | 8.6E-4 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 661 | 683 | 9.539323 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 343 | 12.626622 | IPR000719 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 661 | 675 | - | IPR019775 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15354.1 | SPA1-related 3. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA3 (and SPA4) predominantly regulates elongation growth in adult plants. | 0 |
| RefSeq | XP_011029481.1 | PREDICTED: protein SPA1-RELATED 3 isoform X1 [Populus euphratica] | 0 |
| Q9LJR3 | Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1YJ14 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G119500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology