Basic Information
Locus ID:
populus_peu17229
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 1445993 | 1454920 | + | populus_peu17229 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 104,667.30 Da | 47.60 | 78.39 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 763 | 916 | 5.17067E-57 | - |
| Pfam | PF06337 | DUSP domain | 47 | 146 | 5.7E-23 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 323 | 915 | 2.1E-85 | IPR001394 |
| SUPERFAMILY | SSF143791 | DUSP-like | 20 | 146 | 7.59E-29 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 320 | 918 | 2.55E-110 | IPR038765 |
| Gene3D | G3DSA:3.30.2230.10 | - | 17 | 160 | 2.2E-35 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 308 | 542 | 3.7E-67 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 731 | 925 | 8.3E-58 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 161 | 246 | 2.0E-10 | - |
| SMART | SM00695 | dusp | 42 | 149 | 9.0E-29 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 322 | 918 | 57.57016 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 23 | 146 | 19.073174 | IPR006615 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 860 | 877 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 323 | 338 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_011040601.1 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 9-like [Populus euphratica] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2K1YKS7 | Ubiquitin carboxyl-terminal hydrolase OS=Populus trichocarpa OX=3694 GN=POPTR_011G152500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology