Basic Information
Locus ID:
populus_peu17032
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 27360200 | 27368310 | + | populus_peu17032 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 106,449.76 Da | 38.47 | 95.87 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 641 | 907 | 1.31752E-88 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 47 | 83 | 1.2E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 167 | 225 | 2.2E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 636 | 900 | 1.2E-46 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 58 | 421 | 8.16E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 620 | 922 | 6.7E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 605 | 710 | 1.0E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 711 | 930 | 1.1E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 200 | 304 | 1.5E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 46 | 199 | 2.0E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 305 | 426 | 4.4E-11 | IPR032675 |
| SMART | SM00220 | serkin_6 | 635 | 907 | 1.4E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 635 | 912 | 37.233917 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 755 | 767 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 641 | 663 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011011778.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Populus euphratica] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | B9I771 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G159200 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology