Basic Information
Locus ID:
populus_peu16546
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 20460950 | 20463731 | + | populus_peu16546 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 58,173.73 Da | 42.00 | 80.40 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 235 | 261 | 1.6E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 420 | 511 | 3.03E-9 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 100 | 354 | 2.62E-16 | IPR009091 |
| Gene3D | G3DSA:2.130.10.30 | - | 75 | 313 | 1.4E-20 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 399 | 510 | 1.2E-13 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 443 | 465 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 404 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_011005429.1 | PREDICTED: serine/threonine-protein kinase-like protein CCR4 [Populus euphratica] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1Y3T1 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G103300 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology