Basic Information
Locus ID:
populus_peu16506
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
AMSH-like ubiquitin thioesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 18709370 | 18713360 | - | populus_peu16506 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 31,525.69 Da | 62.68 | 82.11 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08066 | MPN_AMSH_like | 102 | 279 | 4.13124E-92 | IPR044098 |
| Pfam | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 103 | 209 | 3.6E-17 | IPR000555 |
| SUPERFAMILY | SSF102712 | JAB1/MPN domain | 105 | 236 | 8.24E-21 | - |
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | 84 | 279 | 4.9E-67 | - |
| SMART | SM00232 | pad1_6 | 104 | 232 | 8.0E-17 | IPR000555 |
| ProSiteProfiles | PS50249 | MPN domain profile. | 105 | 233 | 29.412512 | IPR037518 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10600.1 | associated molecule with the SH3 domain of STAM 2. | 0 |
| RefSeq | XP_011009553.1 | PREDICTED: AMSH-like ubiquitin thioesterase 2 isoform X2 [Populus euphratica] | 0 |
| Q6NKP9 | AMSH-like ubiquitin thioesterase 2 OS=Arabidopsis thaliana OX=3702 GN=AMSH2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X8CK22 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_037415 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology